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genego metacore software  (GeneGo Inc)

 
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    GeneGo Inc genego metacore software
    Genego Metacore Software, supplied by GeneGo Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genego+metacore+software/genego+metacore/pm39397573-262-24-52
    Average 90 stars, based on 1 article reviews
    genego metacore software - by Bioz Stars, 2026-09
    90/100 stars

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    other:

    Article Title: Bioinformatics approaches for studying molecular sex differences in complex diseases.
    Article Snippet: The direction of the arrows indicates the regulatory pattern, highlighting that the transcription factor c-Myc controls the expression of the other genes in the graph (green arrows represent activating interactions, gray arrows correspond to interactions with unknown downstream effect; network data were retrieved from human interactions in the mammalian ResNet database using GeneGO MetaCore software, version Q1–2024).

    Software:

    Article Title: Molecular Mode of Action and Role of TP53 in the Sensitivity to the Novel Epothilone Sagopilone (ZK-EPO) in A549 Non-Small Cell Lung Cancer Cells
    Article Snippet: .. Differentially regulated genes were subjected to pathway analysis using the GeneGo MetaCore software and database. ..

    Article Title: DNA methylation variations and epigenetic aging in telomere biology disorders
    Article Snippet: Genes that were differentially methylated at two or more CpGs were identified in H-TBD; NAV2 (cg01282852, cg03026982, cg10473623), PRDM8 (cg19409579, cg27018912, cg05059566, cg02458885), SMC4 (cg14322760, cg01464849, cg26663696), TM4FS1 (cg10725542, cg26584465), VARS (cg17619755, cg08899667), and WNT6 (cg22587479, cg00011225, cg13903421, cg25242471) and in NH-TBD: SMC4 ( cg14322760, cg01464849, cg26663696) and WNT6 ( cg22587479, cg00011225, cg13903421, cg25242471) (Supplementary Table ). .. Gene ontology analysis, performed with the GeneGO MetaCore software, showed that the 89 genes with DM-CpGs identified in the phenotypic groups were involved in cell-adhesion processes (cell, cell–cell, cell–cell adhesion via plasma-membrane adhesion molecules, and homophilic cell adhesion via plasma membrane adhesion molecules), animal organ development, detection (of other organism, and of external biotic stimulus), positive regulation of interferon-gamma production, cerebellar granule cell differentiation, and cerebellar granular layer formation (Supplementary Table ). ..

    Article Title: Understanding the Pathogenesis of Kawasaki Disease by Network and Pathway Analysis
    Article Snippet: Furthermore, the signal pathway produced in GeneGo contains many immune response pathways that participate in inflammation, apoptosis, injury, and remodeling process, which have been listed in . .. In addition to the signal pathway of the immune response, ECM-remodeling and plasmin signaling pathway associated with cell adhesion were enriched in GeneGo MetaCore software (FDR < 0.01, P < 0.005). ..

    Article Title: Transcription Profiles of Endothelial Cells in the Rat Ductus Arteriosus during a Perinatal Period
    Article Snippet: .. Enrichment analysis using GeneGo MetaCore software showed that DA endothelium-related biological processes were involved in morphogenesis and development. ..

    Article Title: Molecular Mode of Action and Role of TP53 in the Sensitivity to the Novel Epothilone Sagopilone (ZK-EPO) in A549 Non-Small Cell Lung Cancer Cells
    Article Snippet: .. A Gene Ontology (GO) analysis of the 391 regulated genes with the GeneGo Metacore software revealed a similar occurrence and rank order of biological processes (data not shown) indicating a very similar mechanism of action for both TBAs at high concentration. ..

    Article Title: DNA methylation variations and epigenetic aging in telomere biology disorders
    Article Snippet: .. Gene ontology analysis, performed with the GeneGO MetaCore software, showed that the genes with DM-CpGs were involved in developmental processes (animal organ, nervous system, system, head, multicellular organism, adipose tissue, and brain), differentiation (fat cell and cell), and cellular developmental processes (Supplementary Table ). ..

    Article Title: Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach
    Article Snippet: .. The list of identified proteins and respective normalized fold changes were imported into GeneGo Metacore software to analyze cellular processes significantly altered by IGF-1 and RSV with respect to control. ..

    Clinical Proteomics:

    Article Title: DNA methylation variations and epigenetic aging in telomere biology disorders
    Article Snippet: Genes that were differentially methylated at two or more CpGs were identified in H-TBD; NAV2 (cg01282852, cg03026982, cg10473623), PRDM8 (cg19409579, cg27018912, cg05059566, cg02458885), SMC4 (cg14322760, cg01464849, cg26663696), TM4FS1 (cg10725542, cg26584465), VARS (cg17619755, cg08899667), and WNT6 (cg22587479, cg00011225, cg13903421, cg25242471) and in NH-TBD: SMC4 ( cg14322760, cg01464849, cg26663696) and WNT6 ( cg22587479, cg00011225, cg13903421, cg25242471) (Supplementary Table ). .. Gene ontology analysis, performed with the GeneGO MetaCore software, showed that the 89 genes with DM-CpGs identified in the phenotypic groups were involved in cell-adhesion processes (cell, cell–cell, cell–cell adhesion via plasma-membrane adhesion molecules, and homophilic cell adhesion via plasma membrane adhesion molecules), animal organ development, detection (of other organism, and of external biotic stimulus), positive regulation of interferon-gamma production, cerebellar granule cell differentiation, and cerebellar granular layer formation (Supplementary Table ). ..

    Membrane:

    Article Title: DNA methylation variations and epigenetic aging in telomere biology disorders
    Article Snippet: Genes that were differentially methylated at two or more CpGs were identified in H-TBD; NAV2 (cg01282852, cg03026982, cg10473623), PRDM8 (cg19409579, cg27018912, cg05059566, cg02458885), SMC4 (cg14322760, cg01464849, cg26663696), TM4FS1 (cg10725542, cg26584465), VARS (cg17619755, cg08899667), and WNT6 (cg22587479, cg00011225, cg13903421, cg25242471) and in NH-TBD: SMC4 ( cg14322760, cg01464849, cg26663696) and WNT6 ( cg22587479, cg00011225, cg13903421, cg25242471) (Supplementary Table ). .. Gene ontology analysis, performed with the GeneGO MetaCore software, showed that the 89 genes with DM-CpGs identified in the phenotypic groups were involved in cell-adhesion processes (cell, cell–cell, cell–cell adhesion via plasma-membrane adhesion molecules, and homophilic cell adhesion via plasma membrane adhesion molecules), animal organ development, detection (of other organism, and of external biotic stimulus), positive regulation of interferon-gamma production, cerebellar granule cell differentiation, and cerebellar granular layer formation (Supplementary Table ). ..

    Cell Differentiation:

    Article Title: DNA methylation variations and epigenetic aging in telomere biology disorders
    Article Snippet: Genes that were differentially methylated at two or more CpGs were identified in H-TBD; NAV2 (cg01282852, cg03026982, cg10473623), PRDM8 (cg19409579, cg27018912, cg05059566, cg02458885), SMC4 (cg14322760, cg01464849, cg26663696), TM4FS1 (cg10725542, cg26584465), VARS (cg17619755, cg08899667), and WNT6 (cg22587479, cg00011225, cg13903421, cg25242471) and in NH-TBD: SMC4 ( cg14322760, cg01464849, cg26663696) and WNT6 ( cg22587479, cg00011225, cg13903421, cg25242471) (Supplementary Table ). .. Gene ontology analysis, performed with the GeneGO MetaCore software, showed that the 89 genes with DM-CpGs identified in the phenotypic groups were involved in cell-adhesion processes (cell, cell–cell, cell–cell adhesion via plasma-membrane adhesion molecules, and homophilic cell adhesion via plasma membrane adhesion molecules), animal organ development, detection (of other organism, and of external biotic stimulus), positive regulation of interferon-gamma production, cerebellar granule cell differentiation, and cerebellar granular layer formation (Supplementary Table ). ..

    Concentration Assay:

    Article Title: Molecular Mode of Action and Role of TP53 in the Sensitivity to the Novel Epothilone Sagopilone (ZK-EPO) in A549 Non-Small Cell Lung Cancer Cells
    Article Snippet: .. A Gene Ontology (GO) analysis of the 391 regulated genes with the GeneGo Metacore software revealed a similar occurrence and rank order of biological processes (data not shown) indicating a very similar mechanism of action for both TBAs at high concentration. ..

    Control:

    Article Title: Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach
    Article Snippet: .. The list of identified proteins and respective normalized fold changes were imported into GeneGo Metacore software to analyze cellular processes significantly altered by IGF-1 and RSV with respect to control. ..



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    Image Search Results


    Biological pathways identified by GeneGO metacore pathway analysis as differing over time between BD subjects who responded or failed to respond to treatment with lithium

    Journal: Biology of Mood & Anxiety Disorders

    Article Title: Increased ratio of anti-apoptotic to pro-apoptotic Bcl2 gene-family members in lithium-responders one month after treatment initiation

    doi: 10.1186/2045-5380-2-15

    Figure Lengend Snippet: Biological pathways identified by GeneGO metacore pathway analysis as differing over time between BD subjects who responded or failed to respond to treatment with lithium

    Article Snippet: Network analysis to identify the most significant pathways among genes identified by the ANOVA analysis (above) was carried out using GeneGO Metacore® software (GeneGO Inc., Encinitas, CA).

    Techniques: Transduction, Coagulation